BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 16699

Title: 1H Chemical Shift Assignments for gH617-644 fusion peptide from HSV-1 gH protein   PubMed: 20348105

Deposition date: 2010-02-01 Original release date: 2010-05-05

Authors: Russo, Luigi; Isernia, Carla; Galdiero, Stefania; Falanga, Annarita; Vitiello, Mariateresa; Raiola, Luca; Pedone, Carlo; Galdiero, Massimiliano

Citation: Galdiero, Stefania; Falanga, Annarita; Vitiello, Mariateresa; Raiola, Luca; Russo, Luigi; Pedone, Carlo; Isernia, Carla; Galdiero, Massimiliano. "The Presence of a Single N-terminal Histidine Residue Enhances the Fusogenic Properties of a Membranotropic Peptide Derived from Herpes Simplex Virus Type 1 Glycoprotein H."  J. Biol. Chem. 285, 17123-17136 (2010).

Assembly members:
HSV-1_gH_protein,_gH617-644_fusion_peptide, polymer, 28 residues, 3167.6 Da.

Natural source:   Common Name: Human herpesvirus 1   Taxonomy ID: 10298   Superkingdom: Viruses   Kingdom: not available   Genus/species: Simplexvirus Human herpesvirus 1

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):
HSV-1_gH_protein,_gH617-644_fusion_peptide: VEVLAQQTHGLASTLTRWAH YNALIRAF

Data sets:
Data typeCount
1H chemical shifts207

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1HSV-1 gH protein, gH617-644 fusion peptide1

Entities:

Entity 1, HSV-1 gH protein, gH617-644 fusion peptide 28 residues - 3167.6 Da.

1   VALGLUVALLEUALAGLNGLNTHRHISGLY
2   LEUALASERTHRLEUTHRARGTRPALAHIS
3   TYRASNALALEUILEARGALAPHE

Samples:

sample_gH617-644: HSV-1 gH protein, gH617-644 fusion peptide 1 mM; TFE, [U-99% 2H], 80 % v/v; H2O 20 % v/v

sample_condition_gH617-644: pressure: 1 atm; temperature: 300 K

Experiments:

NameSampleSample stateSample conditions
2D 1H-1H TOCSYsample_gH617-644isotropicsample_condition_gH617-644
2D 1H-1H NOESYsample_gH617-644isotropicsample_condition_gH617-644
2D DQF-COSYsample_gH617-644isotropicsample_condition_gH617-644

Software:

CYANA, Guntert, Mumenthaler and Wuthrich - structure solution

Molmol, Koradi, Billeter and Wuthrich - data analysis

XEASY, Bartels et al. - chemical shift assignment

NMR spectrometers:

  • Varian Unity 500 MHz

Related Database Links:

BMRB 15647 18335
PDB
DBJ BAM73371
EMBL CAA27534 CAA32335
GB AAA45815 AAG17895 ABI63484 ACM62244 ADD59995
REF YP_009137096
SP P06477 P08356 Q9DHD5