BMRB Entry 4905
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR4905
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Title: 1H, 13C and 15N Chemical Shift Assignments for Urea-denatured G88W-110 Fragment of Staphylococcal Nuclease PubMed: 11243822
Deposition date: 2000-11-24 Original release date: 2001-08-08
Authors: Ye, Keqiong; Wang, Jinfeng
Citation: Ye, Keqiong; Wang, Jinfeng. "Self-association Reaction of Denatured Staphylococcal Nuclease Fragments Characterized by Heteronuclear NMR" J. Mol. Biol. 307, 309-322 (2001).
Assembly members:
Staphylococcal Nuclease, polymer, 110 residues, Formula weight is not available
Natural source: Common Name: S. aureus Taxonomy ID: 1280 Superkingdom: Eubacteria Kingdom: not available Genus/species: Staphylococcus aureus
Experimental source: Production method: recombinant technology Host organism: Escherichia coli
Entity Sequences (FASTA):
Staphylococcal Nuclease: ATSTKKLHKEPATLIKAIDG
DTVKLMYKGQPMTFRLLLVD
TPETKHPKKGVEKYGPEASA
FTKKMVENAKKIEVEFDKGQ
RTDKYGRWLAYIYADGKMVN
EALVRQGLAK
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 693 |
| 13C chemical shifts | 322 |
| 15N chemical shifts | 104 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | SNase G88W110 fragment | 1 |
Entities:
Entity 1, SNase G88W110 fragment 110 residues - Formula weight is not available
| 1 | ALA | THR | SER | THR | LYS | LYS | LEU | HIS | LYS | GLU | |
| 2 | PRO | ALA | THR | LEU | ILE | LYS | ALA | ILE | ASP | GLY | |
| 3 | ASP | THR | VAL | LYS | LEU | MET | TYR | LYS | GLY | GLN | |
| 4 | PRO | MET | THR | PHE | ARG | LEU | LEU | LEU | VAL | ASP | |
| 5 | THR | PRO | GLU | THR | LYS | HIS | PRO | LYS | LYS | GLY | |
| 6 | VAL | GLU | LYS | TYR | GLY | PRO | GLU | ALA | SER | ALA | |
| 7 | PHE | THR | LYS | LYS | MET | VAL | GLU | ASN | ALA | LYS | |
| 8 | LYS | ILE | GLU | VAL | GLU | PHE | ASP | LYS | GLY | GLN | |
| 9 | ARG | THR | ASP | LYS | TYR | GLY | ARG | TRP | LEU | ALA | |
| 10 | TYR | ILE | TYR | ALA | ASP | GLY | LYS | MET | VAL | ASN | |
| 11 | GLU | ALA | LEU | VAL | ARG | GLN | GLY | LEU | ALA | LYS |
Samples:
sample_1: Staphylococcal Nuclease, [U-95% 13C; U-90% 15N], 2.5 mM; acetate buffer, [U-99% 2H], 50 mM; Urea 6 M; H2O 90%; D2O 10%
Ex-cond_1: pH: 4.9; temperature: 305 K; ionic strength: 0.05 M
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| HNCACB | not available | not available | not available |
| CBCA(CO)NH | not available | not available | not available |
| HNCO | not available | not available | not available |
| HN(CA)CO | not available | not available | not available |
| H(CCO)NH | not available | not available | not available |
| 3D 1H-15N TOCSY-HSQC | not available | not available | not available |
| 3D 1H-15N NOESY-HSQC | not available | not available | not available |
| 3D 1H-15N/1H-15N HSQC-NOESY-HSQC | not available | not available | not available |
| HNHA | not available | not available | not available |
| 1H-13C CT-HSQC | not available | not available | not available |
Software:
FELIX v98 -
NMR spectrometers:
- Bruker DMX 600 MHz
Related Database Links:
| BMRB | 136 15357 1581 1582 16585 1704 17718 18013 1874 1875 1876 1877 1878 18788 188 189 2784 2785 4010 4052 4053 494 495 496 497 530 5536 6250 6251 644 6907 6908 |
| PDB | |
| DBJ | BAB41979 BAB56977 BAB94634 BAF67032 BAF77694 |
| EMBL | CAA24594 CAG39855 CAG42530 CAI80436 CAQ49298 |
| GB | AAC14660 AAW36415 ABD22328 ABD29945 ABE02272 |
| PRF | 1109959A 710414A |
| REF | NP_371339 NP_374001 NP_645586 WP_000141556 WP_000141557 |
| SP | P00644 Q5HHM4 Q6GB41 Q6GIK1 Q7A6P2 |
Download simulated HSQC data in one of the following formats:
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