BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 5476

Title: Structures of phage-display peptides that bind to the malarial surface protein, apical membrane antigen 1, and block erythrocyte invasion   PubMed: 12924940

Deposition date: 2002-07-24 Original release date: 2003-12-19

Authors: Keizer, David; Miles, Luke; Li, Felomena; Nair, Margie; Anders, Robin; Coley, Andrew; Foley, Michael; Norton, Raymond

Citation: Keizer, David; Miles, Luke; Li, Felomena; Nair, Margie; Anders, Robin; Coley, Andrew; Foley, Michael; Norton, Raymond. "Structures of phage-display peptides that bind to the malarial surface protein, apical membrane antigen 1, and block erythrocyte invasion"  Biochemistry 42, 9915-9923 (2003).

Assembly members:
F1, polymer, 15 residues, Formula weight is not available

Natural source:   Common Name: Enterobacteria phage M13   Taxonomy ID: 10870   Superkingdom: Viruses   Kingdom: not available   Genus/species: Inovirus Enterobacteria phage

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):
F1: GWRLLGFGPASSFSM

Data sets:
Data typeCount
1H chemical shifts81

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1F1 peptide1

Entities:

Entity 1, F1 peptide 15 residues - Formula weight is not available

1   GLYTRPARGLEULEUGLYPHEGLYPROALA
2   SERSERPHESERMET

Samples:

sample_1: F1 1.0 mM

Ex-cond_1: pH: 4.5; temperature: 278 K

Experiments:

NameSampleSample stateSample conditions
2D 1H-1H DQF-COSYnot availablenot availablenot available
2D 1H-1H E.COSYnot availablenot availablenot available
2D 1H-1H NOESYnot availablenot availablenot available
2D 1H-1H TOCSYnot availablenot availablenot available

Software:

xwinnmr - data collection, processing

XEASY - Peak assignments

NMR spectrometers:

  • Bruker AMX 500 MHz
  • Bruker DRX 600 MHz