BMRB Entry 6251
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR6251
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Title: Backbone Chemical Shift Assignments for V66W121 fragment of Staphylococcal Nuclease PubMed: 12850150
Deposition date: 2004-06-24 Original release date: 2004-08-03
Authors: Feng, Yingang; Liu, Dongsheng; Wang, Jinfeng
Citation: Feng, Yingang; Liu, Dongsheng; Wang, Jinfeng. "Native-like partially folded conformations and folding process revealed in the N-terminal large fragments of staphylococcal nuclease: a study by NMR spectroscopy" J. Mol. Biol. 330, 821-837 (2003).
Assembly members:
V66W121, polymer, 121 residues, Formula weight is not available
Natural source: Common Name: Staphylococcus aureus Taxonomy ID: 1280 Superkingdom: Bacteria Kingdom: not available Genus/species: Staphylococcus aureus
Experimental source: Production method: recombinant technology
Entity Sequences (FASTA):
V66W121: ATSTKKLHKEPATLIKAIDG
DTVKLMYKGQPMTFRLLLVD
TPETKHPKKGVEKYGPEASA
FTKKMWENAKKIEVEFDKGQ
RTDKYGRGLAYIYADGKMVN
EALVRQGLAKVAYVYKPNNT
H
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 170 |
| 15N chemical shifts | 107 |
| 13C chemical shifts | 141 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | V66W121 | 1 |
Entities:
Entity 1, V66W121 121 residues - Formula weight is not available
| 1 | ALA | THR | SER | THR | LYS | LYS | LEU | HIS | LYS | GLU | ||||
| 2 | PRO | ALA | THR | LEU | ILE | LYS | ALA | ILE | ASP | GLY | ||||
| 3 | ASP | THR | VAL | LYS | LEU | MET | TYR | LYS | GLY | GLN | ||||
| 4 | PRO | MET | THR | PHE | ARG | LEU | LEU | LEU | VAL | ASP | ||||
| 5 | THR | PRO | GLU | THR | LYS | HIS | PRO | LYS | LYS | GLY | ||||
| 6 | VAL | GLU | LYS | TYR | GLY | PRO | GLU | ALA | SER | ALA | ||||
| 7 | PHE | THR | LYS | LYS | MET | TRP | GLU | ASN | ALA | LYS | ||||
| 8 | LYS | ILE | GLU | VAL | GLU | PHE | ASP | LYS | GLY | GLN | ||||
| 9 | ARG | THR | ASP | LYS | TYR | GLY | ARG | GLY | LEU | ALA | ||||
| 10 | TYR | ILE | TYR | ALA | ASP | GLY | LYS | MET | VAL | ASN | ||||
| 11 | GLU | ALA | LEU | VAL | ARG | GLN | GLY | LEU | ALA | LYS | ||||
| 12 | VAL | ALA | TYR | VAL | TYR | LYS | PRO | ASN | ASN | THR | ||||
| 13 | HIS |
Samples:
sample_1: V66W121, [U-95% 13C; U-95% 15N], 1 mM; deuterated acetate, [U-99% 2H], 50 mM; DSS 50 uM; NaN3 0.02%
Ex-cond_1: pH: 5.0 na; temperature: 298 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 1H-15N HSQC | sample_1 | not available | Ex-cond_1 |
| HNCACB | sample_1 | not available | Ex-cond_1 |
| CBCA(CO)NH | sample_1 | not available | Ex-cond_1 |
| HBHA(CBCA)NH | sample_1 | not available | Ex-cond_1 |
| HBHA(CBCA)(CO)NH | sample_1 | not available | Ex-cond_1 |
| 1H-15N slow exchange spectra | sample_1 | not available | Ex-cond_1 |
Software:
Felix v980 -
NMR spectrometers:
- Bruker DMX 600 MHz
Related Database Links:
| BMRB | 136 15357 1581 1582 16585 1704 17718 18013 1874 1875 1876 1877 1878 18788 188 189 2784 2785 4010 4052 4053 4905 494 495 496 497 530 5536 6250 644 6907 6908 |
| PDB | |
| DBJ | BAB41979 BAB56977 BAB94634 BAF67032 BAF77694 |
| EMBL | CAA24594 CAG39855 CAG42530 CAI80436 CAQ49298 |
| GB | AAC14660 AAW36415 ABD22328 ABD29945 ABE02272 |
| PRF | 1109959A 710414A |
| REF | NP_371339 NP_374001 NP_645586 WP_000141556 WP_000141557 |
| SP | P00644 Q5HHM4 Q6GB41 Q6GIK1 Q7A6P2 |
Download simulated HSQC data in one of the following formats:
CSV: Backbone
or all simulated shifts
SPARKY: Backbone
or all simulated shifts