BMRB Entry 7311
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR7311
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Title: Backbone 1H, 13C, and 15N and CB Assignments for Rat Islet Amyloid Polypeptide PubMed: 17123962
Deposition date: 2006-10-01 Original release date: 2007-05-04
Authors: Williamson, Jessica; Miranker, Andrew
Citation: Williamson, Jessica; Miranker, Andrew. "Direct Detection of Transient alpha-Helical States of Islet Amyloid Polypeptide" Protein Sci. 16, 110-117 (2007).
Assembly members:
Rat Islet Amyliod Polypeptide, polymer, 38 residues, Formula weight is not available
Natural source: Common Name: Rat Taxonomy ID: 10116 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Rattus norvegicus
Experimental source: Production method: recombinant technology
Entity Sequences (FASTA):
Rat Islet Amyliod Polypeptide: KCNTATCATQRLANFLVRSS
NNLGPVLPPTNVGSNTYX
- assigned_chemical_shifts
| Data type | Count |
| 13C chemical shifts | 111 |
| 15N chemical shifts | 37 |
| 1H chemical shifts | 73 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | Rat Islet Amyloid Polypeptide | 1 |
Entities:
Entity 1, Rat Islet Amyloid Polypeptide 38 residues - Formula weight is not available
| 1 | LYS | CYS | ASN | THR | ALA | THR | CYS | ALA | THR | GLN | ||||
| 2 | ARG | LEU | ALA | ASN | PHE | LEU | VAL | ARG | SER | SER | ||||
| 3 | ASN | ASN | LEU | GLY | PRO | VAL | LEU | PRO | PRO | THR | ||||
| 4 | ASN | VAL | GLY | SER | ASN | THR | TYR | NH2 |
Samples:
sample_1: Rat Islet Amyliod Polypeptide, [U-13C; U-15N], 1.5 mM; potassium chloride 0.1 mM; potassium phosphate 0.05 mM; deuterium oxide 10%
conditions_1: pH: 5.5; temperature: 278 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| CBCANH | sample_1 | not available | conditions_1 |
| CBCA(CO)NNH | sample_1 | not available | conditions_1 |
| HNCO | sample_1 | not available | conditions_1 |
| NOESY-15N-HSQC | sample_1 | not available | conditions_1 |
| TOCSY-15N-HSQC | sample_1 | not available | conditions_1 |
| 15N-HSQC | sample_1 | not available | conditions_1 |
Software:
No software information available
NMR spectrometers:
- Varian Unity-Inova 500 MHz
Related Database Links:
| BMRB | 16314 20046 |
| PDB | |
| DBJ | BAA22051 |
| EMBL | CAA37003 |
| GB | AAA37874 AAA40730 AAA41359 AAH27527 EDL10633 |
| REF | NP_034621 NP_036718 XP_006155144 XP_006155145 XP_006237676 |
| SP | P12968 P12969 |
Download simulated HSQC data in one of the following formats:
CSV: Backbone
or all simulated shifts
SPARKY: Backbone
or all simulated shifts