The software and accompanying instructions are provided "as is" without warranty of any kind. The authors do not warrant, guarantee, or make any representations regarding the use, or the results of the use of the software or accompanying instructions in terms of correctness, accuracy, reliabilty, currentness or otherwise. The entire risk as to the results and performance of the software is assumed by you. If the software or instructions are defective, you, and not the authors, assume the entire cost of all necessary servicing, repair or correction.
Victor A. Jaravine, Dr
Dept. of Structural Biology, BIOZENTRUM, Basel university
Klingelbergstr. 70, BASEL CH-4056, Switzerland
tel: +41-61-2672106, fax: +41-61-2672109
email: [email protected]
The programs were written for personal use. Later it seemed that they may be some use to other people, so a few comments appeared. If looked into the code it is not very regular and written in a somewhat personal notes manner. The programs are provided 'as is' and in principle are not supported. However, bug reports and suggestions are generally welcome.
tab2bmrb - Utility to convert protein NMR chem. shifts table to BMRB file format ; BMRB = BioMagResBank
bmrb2tab - Utility to convert BMRB file to chem. shifts table ;
calc_cs - Utility to calc random coil chem. shifts for given protein sequence;
calc - Utility to calc average, power and length NMR pulses (approximately),
1H H2O carrier temperature dependence, PHI angle from 3JHN(CA)HA coupling constant (see program for formulas).
It is possible to type the name of the program without arguments to get helping comment.
In principle, all programs are tested for correctness of produced results.
-Download the file tab2bmrb.tar.gz -Uncompress and untar the file. >gzip -d tab2bmrb.tar.gz >tar -xvf tab2bmrb.tar You will find: Source code, executables, and documentation for the following programs:
tab2bmrb bmrb2tab calc_cs calc