BMRB Entry 11581

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PDB ID: 2run
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR11581
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title: NMR Structures and Localization of Potential Fusion Peptides and Pre-transmembrane Region of SARS-CoV: Implications in Membrane Fusion

Deposition date: 2014-11-06 Original release date: 2016-07-13

Authors: Mahajan, Mukesh; Bhattacharjya, Surajit

Citation: Mahajan, Mukesh; Bhattacharjya, Surajit. "NMR Structures and Localization of Potential Fusion Peptides and Pre-transmembrane Region of SARS-CoV: Implications in Membrane Fusion" Biochim. Biophys. Acta ., .-..

Assembly members:
Pre_transmembrane_domain, polymer, 18 residues, 2378.794 Da.

Natural source: Common Name: not available Taxonomy ID: not available Superkingdom: not available Kingdom: not available Genus/species: not available not available

Experimental source: Production method: chemical synthesis

Entity Sequences (FASTA):
Pre_transmembrane_domain: LGKYEQYIKWPWYVWLGF

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	16
1H chemical shifts	104

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	Pre transmembrane domain	1

Entities:

Entity 1, Pre transmembrane domain 18 residues - 2378.794 Da.

1

LEU

GLY

LYS

TYR

GLU

GLN

TYR

ILE

LYS

TRP

2

PRO

TRP

TYR

VAL

TRP

LEU

GLY

PHE

Samples:

sample_1: Pre transmembrane domain 0.5 mM; DPC, [U-99% 2H], 125 mM; H2O 90%; D2O, [U-100% 2H], 10%

sample_conditions_1: pH: 4.7; temperature: 315 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D 1H-1H TOCSY	sample_1	anisotropic	sample_conditions_1
2D 1H-1H NOESY	sample_1	anisotropic	sample_conditions_1
2D 1H-13C HSQC	sample_1	anisotropic	sample_conditions_1

Software:

SPARKY v3.113, Goddard - chemical shift assignment, data analysis

CYANA v2.1, Guntert, Mumenthaler and Wuthrich - Structure calculation

NMR spectrometers:

Bruker Avance 600 MHz